Breeding without breeding: minimum fingerprinting effort with respect to the effective population size

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11230%2F11%3A10103619" target="_blank" >RIV/00216208:11230/11:10103619 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/60460709:41320/11:50498

Výsledek na webu

<a href="http://dx.doi.org/10.1007/s11295-011-0395-1" target="_blank" >http://dx.doi.org/10.1007/s11295-011-0395-1</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s11295-011-0395-1" target="_blank" >10.1007/s11295-011-0395-1</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Breeding without breeding: minimum fingerprinting effort with respect to the effective population size

Popis výsledku v původním jazyce

We present a probabilistic model to minimize the fingerprinting effort associated with the implementation of the "breeding without breeding" scheme under partial pedigree reconstruction. Our approach is directed at achieving a declared target population''s minimum effective population size (N e ), following the pedigree reconstruction and genotypic selection and is based on the graph theory algorithm. The primary advantage of the proposed method is to reduce the cost associated with fingerprinting before the implementation of the pedigree reconstruction for seed parent-offspring derived from breeding arboreta and production or natural populations. Stochastic simulation was conducted to test the method''s efficiency assuming a simple polygenic model anda single trait. Hypothetical population consisted of 30 parental trees that were paired at random (selfing excluded), resulting in 600 individuals (potential candidates for forwards selection). The male parentage was assumed initially un

Název v anglickém jazyce

Breeding without breeding: minimum fingerprinting effort with respect to the effective population size

Popis výsledku anglicky

We present a probabilistic model to minimize the fingerprinting effort associated with the implementation of the "breeding without breeding" scheme under partial pedigree reconstruction. Our approach is directed at achieving a declared target population''s minimum effective population size (N e ), following the pedigree reconstruction and genotypic selection and is based on the graph theory algorithm. The primary advantage of the proposed method is to reduce the cost associated with fingerprinting before the implementation of the pedigree reconstruction for seed parent-offspring derived from breeding arboreta and production or natural populations. Stochastic simulation was conducted to test the method''s efficiency assuming a simple polygenic model anda single trait. Hypothetical population consisted of 30 parental trees that were paired at random (selfing excluded), resulting in 600 individuals (potential candidates for forwards selection). The male parentage was assumed initially un

Druh

J_x - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)

CEP obor

EB - Genetika a molekulární biologie

OECD FORD obor

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Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

Z - Vyzkumny zamer (s odkazem do CEZ)<br>S - Specificky vyzkum na vysokych skolach

Rok uplatnění

2011

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Tree Genetics and Genomes

ISSN

1614-2942

e-ISSN

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Svazek periodika

7

Číslo periodika v rámci svazku

5

Stát vydavatele periodika

DE - Spolková republika Německo

Počet stran výsledku

10

Strana od-do

1069-1078

Kód UT WoS článku

000299506900015

EID výsledku v databázi Scopus

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