Chemotype diversity in Planktothrix rubescens (cyanobacteria) populations is correlated to lake depth

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14110%2F17%3A00096470" target="_blank" >RIV/00216224:14110/17:00096470 - isvavai.cz</a>

Výsledek na webu

<a href="http://dx.doi.org/10.1111/1758-2229.12519" target="_blank" >http://dx.doi.org/10.1111/1758-2229.12519</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1111/1758-2229.12519" target="_blank" >10.1111/1758-2229.12519</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Chemotype diversity in Planktothrix rubescens (cyanobacteria) populations is correlated to lake depth

Popis výsledku v původním jazyce

The cyanobacterial species Planktothrix rubescens is known to preferably inhabit deep, stratified, oligo- to mesotrophic lakes. It is also known for the production of diverse bioactive peptides, including the hepatotoxic microcystins. A number of studies showed that P. rubescens populations generally consist of multiple distinct genotypes or chemotypes, respectively. In the present study, variability of chemotype diversity was analysed. Filaments of P. rubescens were isolated from water samples originating from 10 European lakes and analysed by MALDI-TOF mass spectrometry. In most of the analysed filaments multiple peptides belonging to multiple peptide classes could be detected. A resulting data matrix of 964 filaments and 37 individual peptides was subjected to correspondence analysis and K-means clustering. From the latter analysis the distribution of chemotypes among the lakes was established and diversity estimated by computing Shannon-Indices. Diversity varied strongly among lakes with the lowest diversity found in non-alpine lakes. Further, chemotype diversity was strongly correlated to the maximum depth of the sampled lakes in alpine and non-alpine lakes. The possible influence of both factors, geographic isolation and water column depth, on the observed patterns of chemotype diversity of P. rubescens populations is discussed.

Název v anglickém jazyce

Chemotype diversity in Planktothrix rubescens (cyanobacteria) populations is correlated to lake depth

Popis výsledku anglicky

The cyanobacterial species Planktothrix rubescens is known to preferably inhabit deep, stratified, oligo- to mesotrophic lakes. It is also known for the production of diverse bioactive peptides, including the hepatotoxic microcystins. A number of studies showed that P. rubescens populations generally consist of multiple distinct genotypes or chemotypes, respectively. In the present study, variability of chemotype diversity was analysed. Filaments of P. rubescens were isolated from water samples originating from 10 European lakes and analysed by MALDI-TOF mass spectrometry. In most of the analysed filaments multiple peptides belonging to multiple peptide classes could be detected. A resulting data matrix of 964 filaments and 37 individual peptides was subjected to correspondence analysis and K-means clustering. From the latter analysis the distribution of chemotypes among the lakes was established and diversity estimated by computing Shannon-Indices. Diversity varied strongly among lakes with the lowest diversity found in non-alpine lakes. Further, chemotype diversity was strongly correlated to the maximum depth of the sampled lakes in alpine and non-alpine lakes. The possible influence of both factors, geographic isolation and water column depth, on the observed patterns of chemotype diversity of P. rubescens populations is discussed.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10511 - Environmental sciences (social aspects to be 5.7)

Projekt

—

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2017

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Environmental Microbiology Reports

ISSN

1758-2229

e-ISSN

—

Svazek periodika

9

Číslo periodika v rámci svazku

2

Stát vydavatele periodika

US - Spojené státy americké

Počet stran výsledku

11

Strana od-do

158-168

Kód UT WoS článku

000397493300012

EID výsledku v databázi Scopus

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