TRITON 4 : software for ligand-binding protein engineering

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F09%3A00029247" target="_blank" >RIV/00216224:14310/09:00029247 - isvavai.cz</a>

Výsledek na webu

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DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

TRITON 4 : software for ligand-binding protein engineering

Popis výsledku v původním jazyce

The program TRITON 4 is a graphical tool for computer-aided protein engineering. It implements methodology of computational site-directed mutagenesis to design new protein mutants with required properties. It uses the external program MODELLER to model structures of new protein mutants based on the wild-type structure by homology modelling method. Ligand binding properties of the mutants can be studied by docking methodology using the external program AutoDock. Ligand binding modes and affinities of individual protein mutants are obtained as a result. Binding properties can also be analyzed by visualization of affinity maps or by calculation of electrostatic potential between ligand and individual residues of binding site. The program TRITON 4 offers graphical tools for preparation of the input files and for visualization of output data. The program uses projects to organize computational data. The program TRITON 4 is available for Linux operating system.

Název v anglickém jazyce

TRITON 4 : software for ligand-binding protein engineering

Popis výsledku anglicky

The program TRITON 4 is a graphical tool for computer-aided protein engineering. It implements methodology of computational site-directed mutagenesis to design new protein mutants with required properties. It uses the external program MODELLER to model structures of new protein mutants based on the wild-type structure by homology modelling method. Ligand binding properties of the mutants can be studied by docking methodology using the external program AutoDock. Ligand binding modes and affinities of individual protein mutants are obtained as a result. Binding properties can also be analyzed by visualization of affinity maps or by calculation of electrostatic potential between ligand and individual residues of binding site. The program TRITON 4 offers graphical tools for preparation of the input files and for visualization of output data. The program uses projects to organize computational data. The program TRITON 4 is available for Linux operating system.

Druh

R - Software

CEP obor

CE - Biochemie

OECD FORD obor

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Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)

Rok uplatnění

2009

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Interní identifikační kód produktu

TRITON 4

Technické parametry

software pro proteinove inzenyrstvi

Ekonomické parametry

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IČO vlastníka výsledku

00216224

Název vlastníka

Masarykova univerzita