Adaptive Execution Planning in Biomedical Workflow Management Systems

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216305%3A26230%2F21%3APU143412" target="_blank" >RIV/00216305:26230/21:PU143412 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/00216305:26230/19:PU135185

Výsledek na webu

<a href="https://www.fit.vut.cz/research/publication/12258/" target="_blank" >https://www.fit.vut.cz/research/publication/12258/</a>

DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

Adaptive Execution Planning in Biomedical Workflow Management Systems

Popis výsledku v původním jazyce

Workflow management systems try to move grid, cloud and high performance computing (HPC) services closer to scientific and industrial community by providing a user-friendly interface enabling definition of complex problems presented as workflows. Workflows provide a formal way to define and automate multi-step procedures reflecting real-world phenomena. However, this still places demands on users to decide how to execute particular tasks in workflows. k-Dispatch, a platform providing automated tasks execution, planning and monitoring, focuses on selected workflows from medical environment. For security reasons, only in-house code binaries tuned for specific HPC resources are used. k-Dispatch screens out users from the complexity of HPC systems. This paper describes how the presented framework deals with the task execution planning. Static planning that uses default execution parameters may not be sufficient for the effective execution since the results delivery is time-constrained, and the

Název v anglickém jazyce

Adaptive Execution Planning in Biomedical Workflow Management Systems

Popis výsledku anglicky

Workflow management systems try to move grid, cloud and high performance computing (HPC) services closer to scientific and industrial community by providing a user-friendly interface enabling definition of complex problems presented as workflows. Workflows provide a formal way to define and automate multi-step procedures reflecting real-world phenomena. However, this still places demands on users to decide how to execute particular tasks in workflows. k-Dispatch, a platform providing automated tasks execution, planning and monitoring, focuses on selected workflows from medical environment. For security reasons, only in-house code binaries tuned for specific HPC resources are used. k-Dispatch screens out users from the complexity of HPC systems. This paper describes how the presented framework deals with the task execution planning. Static planning that uses default execution parameters may not be sufficient for the effective execution since the results delivery is time-constrained, and the

Druh

O - Ostatní výsledky

CEP obor

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OECD FORD obor

10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Projekt

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Návaznosti

S - Specificky vyzkum na vysokych skolach

Rok uplatnění

2021

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů