Analysis of promoters of genes putatively involved in regulation of lupulin and dissecting the role of miRNAs in the regulatory network

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F14864347%3A_____%2F19%3AN0000027" target="_blank" >RIV/14864347:_____/19:N0000027 - isvavai.cz</a>

Výsledek na webu

<a href="https://www.actahort.org/books/1236/1236_20.htm" target="_blank" >https://www.actahort.org/books/1236/1236_20.htm</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.17660/ActaHortic.2019.1236.20" target="_blank" >10.17660/ActaHortic.2019.1236.20</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Analysis of promoters of genes putatively involved in regulation of lupulin and dissecting the role of miRNAs in the regulatory network

Popis výsledku v původním jazyce

The regulation of gene expression involves a multifarious regulatory system. Each gene contains a unique combination of cis-acting regulatory sequence elements in the 5' regulatory region that determines its temporal and spatial expression. Recent release of Humulus lupulus (hop), enabled us to predict the possible cis-acting regulatory elements by by scanning 2 kbp of 5' regulatory regions of genes important for lupulin biosynthesis, using Plant CARE, PLACE and Genomatix Matinspector professional databases. The result reveals the probable cis-acting regulatory elements that possibly are involved in the expression genes important for lupulin biosynthesis. In addition, new generation sequencing of small RNAs in hop leads to significant progress in identification of microRNAs that act as predominat regulators of transcription factors (TFs). This study is the first endeavor on mining of miRNAs and analyzing their involvement in secondary metabolism in hop.

Název v anglickém jazyce

Analysis of promoters of genes putatively involved in regulation of lupulin and dissecting the role of miRNAs in the regulatory network

Popis výsledku anglicky

The regulation of gene expression involves a multifarious regulatory system. Each gene contains a unique combination of cis-acting regulatory sequence elements in the 5' regulatory region that determines its temporal and spatial expression. Recent release of Humulus lupulus (hop), enabled us to predict the possible cis-acting regulatory elements by by scanning 2 kbp of 5' regulatory regions of genes important for lupulin biosynthesis, using Plant CARE, PLACE and Genomatix Matinspector professional databases. The result reveals the probable cis-acting regulatory elements that possibly are involved in the expression genes important for lupulin biosynthesis. In addition, new generation sequencing of small RNAs in hop leads to significant progress in identification of microRNAs that act as predominat regulators of transcription factors (TFs). This study is the first endeavor on mining of miRNAs and analyzing their involvement in secondary metabolism in hop.

Druh

D - Stať ve sborníku

CEP obor

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OECD FORD obor

40401 - Agricultural biotechnology and food biotechnology

Projekt

<a href="/cs/project/GA13-03037S" target="_blank" >GA13-03037S: Kombinační regulace a regulační síť transkripčních faktorů účastnících se biosyntézy ozdravných prenylflavonoidů chmelu (Humulus lupulus L.).</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2019

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název statě ve sborníku

Acta Horticulturae

ISBN

978-94-6261-234-1

ISSN

0567-7572

e-ISSN

2406-6168

Počet stran výsledku

5

Strana od-do

153-157

Název nakladatele

International Society for Horticultural Science

Místo vydání

Leuven

Místo konání akce

Yakima, USA

Datum konání akce

4. 8. 2015

Typ akce podle státní příslušnosti

WRD - Celosvětová akce

Kód UT WoS článku

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