Applications of next-generation sequencing in fisheries research: A review

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60076658%3A12520%2F17%3A43891192" target="_blank" >RIV/60076658:12520/17:43891192 - isvavai.cz</a>

Výsledek na webu

<a href="http://www.sciencedirect.com/science/article/pii/S0165783616302338" target="_blank" >http://www.sciencedirect.com/science/article/pii/S0165783616302338</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.fishres.2016.07.021" target="_blank" >10.1016/j.fishres.2016.07.021</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Applications of next-generation sequencing in fisheries research: A review

Popis výsledku v původním jazyce

The rapid advancement and decreasing costs of next-generation sequencing (NGS) technologies have revolutionized the field of genomics and beyond. NGS has led to astonishing number of scientific advances and has offered a paradigm shift from gene to genome-wide research in the field of fisheries and aqua culture. Researchers in fish biology have used NGS to discover novel genetic markers for population and traceability studies. Additionally, NGS technologies have been utilized for ecotoxicological applications, genome-wide characterization to find the genomic regions associated with commercially important traits, profiling of messenger-RNAs and micro-RNAs to study the control of biological processes, and to learn more about evolutionary questions. In recent years, great efforts have been made on sequencing the genomes of economically important aquaculture species. These efforts have shown astounding potential to bring enormous change in genetic and biological research in fisheries and aquaculture. Nevertheless, genomic information for most of the fish species is still lacking and results of some studies using NGS were presented without keeping proper sampling and/or experimental design. Future studies should be spread on other non-model species, but with proper sampling respecting aim of such studies. Only then, it is possible to understand well genetic and biological significance of investigated species for fisheries and aquaculture. This review summarizes various applications of next-generation sequencing that has been used in fishery research up to now.

Název v anglickém jazyce

Applications of next-generation sequencing in fisheries research: A review

Popis výsledku anglicky

The rapid advancement and decreasing costs of next-generation sequencing (NGS) technologies have revolutionized the field of genomics and beyond. NGS has led to astonishing number of scientific advances and has offered a paradigm shift from gene to genome-wide research in the field of fisheries and aqua culture. Researchers in fish biology have used NGS to discover novel genetic markers for population and traceability studies. Additionally, NGS technologies have been utilized for ecotoxicological applications, genome-wide characterization to find the genomic regions associated with commercially important traits, profiling of messenger-RNAs and micro-RNAs to study the control of biological processes, and to learn more about evolutionary questions. In recent years, great efforts have been made on sequencing the genomes of economically important aquaculture species. These efforts have shown astounding potential to bring enormous change in genetic and biological research in fisheries and aquaculture. Nevertheless, genomic information for most of the fish species is still lacking and results of some studies using NGS were presented without keeping proper sampling and/or experimental design. Future studies should be spread on other non-model species, but with proper sampling respecting aim of such studies. Only then, it is possible to understand well genetic and biological significance of investigated species for fisheries and aquaculture. This review summarizes various applications of next-generation sequencing that has been used in fishery research up to now.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

40103 - Fishery

Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2017

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Fisheries Research

ISSN

0165-7836

e-ISSN

—

Svazek periodika

186

Číslo periodika v rámci svazku

1

Stát vydavatele periodika

NL - Nizozemsko

Počet stran výsledku

12

Strana od-do

11-22

Kód UT WoS článku

000390494900002

EID výsledku v databázi Scopus

2-s2.0-84980347669