Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F12%3A00378001" target="_blank" >RIV/60077344:_____/12:00378001 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/60076658:12310/12:43883616

Výsledek na webu

<a href="http://onlinelibrary.wiley.com/doi/10.1111/j.1755-0998.2012.03143.x/pdf" target="_blank" >http://onlinelibrary.wiley.com/doi/10.1111/j.1755-0998.2012.03143.x/pdf</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1111/j.1755-0998.2012.03143.x" target="_blank" >10.1111/j.1755-0998.2012.03143.x</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence

Popis výsledku v původním jazyce

The enormous cytochrome oxidase subunit I (COI) sequence database being assembled from the various DNA barcoding projects constitutes an almost unprecedented amount of data for molecular systematics, in addition to its role in species identification anddiscovery. We have assembled a data set for the hyperdiverse, cosmopolitan parasitic wasp superfamily Ichneumonoidea. Barcoding data were assembled for 4168 putative species-level terminals, representing 671 genera and all but ten of the currently recognized subfamilies. We show that when subjected to phylogenetic analysis using both maximum likelihood and parsimony, there is a broad correlation between taxonomic congruence and number of included sequences. We additionally present a new measure of taxonomic congruence, the Simpson dominance index, which gives greater weight to morphologically recognized taxonomic groups (subfamilies) recovered with most representatives in one or a few contiguous groups or sub clusters.

Název v anglickém jazyce

Utility of the DNA barcoding gene fragment for parasitic wasp phylogeny (Hymenoptera: Ichneumonoidea): data release and new measure of taxonomic congruence

Popis výsledku anglicky

The enormous cytochrome oxidase subunit I (COI) sequence database being assembled from the various DNA barcoding projects constitutes an almost unprecedented amount of data for molecular systematics, in addition to its role in species identification anddiscovery. We have assembled a data set for the hyperdiverse, cosmopolitan parasitic wasp superfamily Ichneumonoidea. Barcoding data were assembled for 4168 putative species-level terminals, representing 671 genera and all but ten of the currently recognized subfamilies. We show that when subjected to phylogenetic analysis using both maximum likelihood and parsimony, there is a broad correlation between taxonomic congruence and number of included sequences. We additionally present a new measure of taxonomic congruence, the Simpson dominance index, which gives greater weight to morphologically recognized taxonomic groups (subfamilies) recovered with most representatives in one or a few contiguous groups or sub clusters.

Druh

J_x - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)

CEP obor

EB - Genetika a molekulární biologie

OECD FORD obor

—

Projekt

<a href="/cs/project/GA206%2F09%2F0115" target="_blank" >GA206/09/0115: Ekologické faktory určující druhovou rozmanitost v tropických lesích: syntéza pro společenstva motýlů (Lepidoptera) na Nové Guineji</a><br>

Návaznosti

Z - Vyzkumny zamer (s odkazem do CEZ)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2012

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Molecular Ecology Resources

ISSN

1755-098X

e-ISSN

—

Svazek periodika

12

Číslo periodika v rámci svazku

4

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

10

Strana od-do

676-685

Kód UT WoS článku

000305070300013

EID výsledku v databázi Scopus

—