Functional and phylogenetic response of soil prokaryotic community under an artificial moisture gradient

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F18%3A00490853" target="_blank" >RIV/60077344:_____/18:00490853 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/00216208:11310/18:10378425

Výsledek na webu

<a href="http://dx.doi.org/10.1016/j.apsoil.2017.12.009" target="_blank" >http://dx.doi.org/10.1016/j.apsoil.2017.12.009</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.apsoil.2017.12.009" target="_blank" >10.1016/j.apsoil.2017.12.009</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Functional and phylogenetic response of soil prokaryotic community under an artificial moisture gradient

Popis výsledku v původním jazyce

Moisture is recognized as a key factor shaping the structure of soil microbial community and its function in soil ecosystem. However, the temporal response patterns of soil microbes under various moisture regimes remain poorly understood. Therefore, the main objective of our study was to reveal how moisture regulates prokaryotic community structure, diversity, phylogenetic structure and finally how moisture regulates greenhouse gas emissions, as an indicator of microbial community function. We monitored prokaryotic community in soil incubated under an artificial moisture gradient for three months. We observed robust effects of both moisture gradient and incubation time on increased greenhouse gas emissions (methane, carbon dioxide and nitrous oxide). Furthermore, the moisture gradient as well as the incubation time exerted significant effects on species turnover of the soil prokaryotic community. In contrast, the artificial moisture gradient did not show any significant effects on prokaryotic alpha diversity. Alpha diversity of the soil prokaryotic community decreased significantly with incubation time. Different community assembly patterns were observed (based on both the mean nearest relatedness index (NRI) and nearest taxon index (NTI)). The mean NRI exhibited the dominance of stochastic factors, while the NTI indicated the dominance of deterministic factors. The prokaryotic communities in soils with less moisture tended to be controlled by stochastic factors, while prokaryotes in soils with higher moisture (60%) were controlled by deterministic factors. Relative abundances of oligotrophs and copiotrophs did not change significantly along the artificial moisture gradient, while the relative abundances of some prokaryotic taxa did vary significantly along the artificial moisture gradient.

Název v anglickém jazyce

Functional and phylogenetic response of soil prokaryotic community under an artificial moisture gradient

Popis výsledku anglicky

Moisture is recognized as a key factor shaping the structure of soil microbial community and its function in soil ecosystem. However, the temporal response patterns of soil microbes under various moisture regimes remain poorly understood. Therefore, the main objective of our study was to reveal how moisture regulates prokaryotic community structure, diversity, phylogenetic structure and finally how moisture regulates greenhouse gas emissions, as an indicator of microbial community function. We monitored prokaryotic community in soil incubated under an artificial moisture gradient for three months. We observed robust effects of both moisture gradient and incubation time on increased greenhouse gas emissions (methane, carbon dioxide and nitrous oxide). Furthermore, the moisture gradient as well as the incubation time exerted significant effects on species turnover of the soil prokaryotic community. In contrast, the artificial moisture gradient did not show any significant effects on prokaryotic alpha diversity. Alpha diversity of the soil prokaryotic community decreased significantly with incubation time. Different community assembly patterns were observed (based on both the mean nearest relatedness index (NRI) and nearest taxon index (NTI)). The mean NRI exhibited the dominance of stochastic factors, while the NTI indicated the dominance of deterministic factors. The prokaryotic communities in soils with less moisture tended to be controlled by stochastic factors, while prokaryotes in soils with higher moisture (60%) were controlled by deterministic factors. Relative abundances of oligotrophs and copiotrophs did not change significantly along the artificial moisture gradient, while the relative abundances of some prokaryotic taxa did vary significantly along the artificial moisture gradient.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10606 - Microbiology

Projekt

—

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2018

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Applied Soil Ecology

ISSN

0929-1393

e-ISSN

—

Svazek periodika

124

Číslo periodika v rámci svazku

March

Stát vydavatele periodika

NL - Nizozemsko

Počet stran výsledku

7

Strana od-do

372-378

Kód UT WoS článku

000428331000045

EID výsledku v databázi Scopus

2-s2.0-85039438191