Phylogenetic insights into the Salicaceae: The evolution of willows and beyond

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F24%3A00597137" target="_blank" >RIV/60077344:_____/24:00597137 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/61388971:_____/24:00598014 RIV/60076658:12310/24:43908607 RIV/61989592:15310/24:73625751

Výsledek na webu

<a href="https://www.sciencedirect.com/science/article/pii/S1055790324001532/pdfft?md5=ef314acf1a28b68faf600b4943e9537b&pid=1-s2.0-S1055790324001532-main.pdf" target="_blank" >https://www.sciencedirect.com/science/article/pii/S1055790324001532/pdfft?md5=ef314acf1a28b68faf600b4943e9537b&pid=1-s2.0-S1055790324001532-main.pdf</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.ympev.2024.108161" target="_blank" >10.1016/j.ympev.2024.108161</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Phylogenetic insights into the Salicaceae: The evolution of willows and beyond

Popis výsledku v původním jazyce

The Salicaceae includes approximately 54 genera and over 1,400 species with a cosmopolitan distribution. Members of the family are well-known for their diverse secondary plant metabolites, and they play crucial roles in tropical and temperate forest ecosystems. Phylogenetic reconstruction of the Salicaceae has been historically challenging due to the limitations of molecular markers and the extensive history of hybridization and polyploidy within the family. Our study employs whole-genome sequencing of 74 species to generate an extensive phylogeny of the Salicaceae. We generated two RAD-Seq enriched whole-genome sequence datasets and extracted two additional gene sets corresponding to the universal Angiosperms353 and Salicaceae-specific targeted-capture arrays. We reconstructed maximum likelihood-based molecular phylogenies using supermatrix and coalescent-based supertree approaches. Our fossil-calibrated phylogeny estimates that the Salicaceae originated around 128 million years ago and unravels the complex taxonomic relationships within the family. Our findings confirm the non-monophyly of the subgenus Salix s.l. and further support the merging of subgenera Chamaetia and Vetrix, both of which exhibit intricate patterns within and among different sections. Overall, our study not only enhances our understanding of the evolution of the Salicaceae, but also provides valuable insights into the complex relationships within the family.

Název v anglickém jazyce

Phylogenetic insights into the Salicaceae: The evolution of willows and beyond

Popis výsledku anglicky

The Salicaceae includes approximately 54 genera and over 1,400 species with a cosmopolitan distribution. Members of the family are well-known for their diverse secondary plant metabolites, and they play crucial roles in tropical and temperate forest ecosystems. Phylogenetic reconstruction of the Salicaceae has been historically challenging due to the limitations of molecular markers and the extensive history of hybridization and polyploidy within the family. Our study employs whole-genome sequencing of 74 species to generate an extensive phylogeny of the Salicaceae. We generated two RAD-Seq enriched whole-genome sequence datasets and extracted two additional gene sets corresponding to the universal Angiosperms353 and Salicaceae-specific targeted-capture arrays. We reconstructed maximum likelihood-based molecular phylogenies using supermatrix and coalescent-based supertree approaches. Our fossil-calibrated phylogeny estimates that the Salicaceae originated around 128 million years ago and unravels the complex taxonomic relationships within the family. Our findings confirm the non-monophyly of the subgenus Salix s.l. and further support the merging of subgenera Chamaetia and Vetrix, both of which exhibit intricate patterns within and among different sections. Overall, our study not only enhances our understanding of the evolution of the Salicaceae, but also provides valuable insights into the complex relationships within the family.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10611 - Plant sciences, botany

Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2024

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Molecular Phylogenetics and Evolution

ISSN

1055-7903

e-ISSN

1095-9513

Svazek periodika

199

Číslo periodika v rámci svazku

OCT 01

Stát vydavatele periodika

US - Spojené státy americké

Počet stran výsledku

13

Strana od-do

108161

Kód UT WoS článku

001291785100001

EID výsledku v databázi Scopus

2-s2.0-85200909624