Fungal Communities in Soils: Soil Organic Matter Degradation

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F16%3A00472656" target="_blank" >RIV/61388971:_____/16:00472656 - isvavai.cz</a>

Výsledek na webu

<a href="http://dx.doi.org/10.1007/978-1-4939-3369-3_5" target="_blank" >http://dx.doi.org/10.1007/978-1-4939-3369-3_5</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/978-1-4939-3369-3_5" target="_blank" >10.1007/978-1-4939-3369-3_5</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Fungal Communities in Soils: Soil Organic Matter Degradation

Popis výsledku v původním jazyce

Stable isotope probing (SIP) provides the opportunity to label decomposer microorganisms that build their biomass on a specific substrate. In combination with high-throughput sequencing, SIP allows for the identification of fungal community members involved in a particular decomposition process. Further information can be gained through gene-targeted metagenomics and metatranscriptomics, opening the possibility to describe the pool of genes catalyzing specific decomposition reactions in situ and to identify the diversity of genes that are expressed. When combined with gene descriptions of fungal isolates from the same environment, specific biochemical reactions involved in decomposition can be linked to individual fungal taxa. Here we describe the use of these methods to explore the cellulolytic fungal community in forest litter and soil.

Název v anglickém jazyce

Fungal Communities in Soils: Soil Organic Matter Degradation

Popis výsledku anglicky

Stable isotope probing (SIP) provides the opportunity to label decomposer microorganisms that build their biomass on a specific substrate. In combination with high-throughput sequencing, SIP allows for the identification of fungal community members involved in a particular decomposition process. Further information can be gained through gene-targeted metagenomics and metatranscriptomics, opening the possibility to describe the pool of genes catalyzing specific decomposition reactions in situ and to identify the diversity of genes that are expressed. When combined with gene descriptions of fungal isolates from the same environment, specific biochemical reactions involved in decomposition can be linked to individual fungal taxa. Here we describe the use of these methods to explore the cellulolytic fungal community in forest litter and soil.

Druh

C - Kapitola v odborné knize

CEP obor

EE - Mikrobiologie, virologie

OECD FORD obor

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Projekt

<a href="/cs/project/GA13-06763S" target="_blank" >GA13-06763S: Houby v lesních půdách a opadu: biogeografie a ekologie v regionálním měřítku</a><br>

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2016

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název knihy nebo sborníku

Microbial Environmental Genomics (MEG)

ISBN

978-1-4939-3369-3

Počet stran výsledku

12

Strana od-do

89-100-89-100

Počet stran knihy

321

Název nakladatele

HUMANA PRESS INC

Místo vydání

Totowa

Kód UT WoS kapitoly

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