Svornostia abyssi gen. nov., sp. nov. isolated from the world's deepest silver-uranium mine currently devoted to the extraction of radon-saturated water

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F24%3A00602798" target="_blank" >RIV/61388971:_____/24:00602798 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/60461373:22330/24:43929527 RIV/60162694:G33__/24:N0000007

Výsledek na webu

<a href="https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006432" target="_blank" >https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006432</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1099/ijsem.0.006432" target="_blank" >10.1099/ijsem.0.006432</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Svornostia abyssi gen. nov., sp. nov. isolated from the world's deepest silver-uranium mine currently devoted to the extraction of radon-saturated water

Popis výsledku v původním jazyce

A Gram-stain-positive, rod-shaped, aerobic, motile bacterium, J379(T), was isolated from radioactive water spring C1, located in a former silver-uranium mine in the Czech Republic. This slow-growing strain exhibited optimal growth at 24-28 degrees C on solid media with <1 % salt concentration and alkaline pH 8-10. The only respiratory quinone found in strain J379(T) was MK-7(H-4). C-18:1 omega 9c (60.9 %), C-18:0 (9.4 %), C-16:0 and alcohol-C-18:0 (both 6.2 %) were found to be the major fatty acids. The peptidoglycan contained directly cross-linked meso-diaminopimelic acid. Phylogenetic reconstruction based on the 16S rRNA gene sequences and the core-genome analysis revealed that strain J379(T) forms a separate phylogenetic lineage within the recently amended order Solirubrobacterales. A comparison of the 16S rRNA gene sequences between strain J379(T) and other members of the order Solirubrobacterales showed <96 % similarity. This analysis revealed that the closest type strains were Parviterribacter kavangonensis D16/0 /H6(T) (95.2 %), Capillimicrobium parvum 0166_1(T) (94.9 %) and Conexibacter arvalis KV-962(T) (94.5 %). Whole-genome analysis showed that the closest type strain was Baekduia soli BR7-21(T) with an average nucleotide identity of 78 %, average amino acid identity of 63.2 % and percentage of conserved proteins of 48.2 %. The G+C content of the J379T genomic DNA was 71.7 mol%. Based on the phylogenetic and phylogenomic data, as well as its physiological characteristics, strain J379(T) is proposed to represent a type strain (DSM 113746(T)=CCM 9300(T)) of Svornostia abyssi gen. nov. sp. nov. within the family Baekduiaceae.

Název v anglickém jazyce

Svornostia abyssi gen. nov., sp. nov. isolated from the world's deepest silver-uranium mine currently devoted to the extraction of radon-saturated water

Popis výsledku anglicky

A Gram-stain-positive, rod-shaped, aerobic, motile bacterium, J379(T), was isolated from radioactive water spring C1, located in a former silver-uranium mine in the Czech Republic. This slow-growing strain exhibited optimal growth at 24-28 degrees C on solid media with <1 % salt concentration and alkaline pH 8-10. The only respiratory quinone found in strain J379(T) was MK-7(H-4). C-18:1 omega 9c (60.9 %), C-18:0 (9.4 %), C-16:0 and alcohol-C-18:0 (both 6.2 %) were found to be the major fatty acids. The peptidoglycan contained directly cross-linked meso-diaminopimelic acid. Phylogenetic reconstruction based on the 16S rRNA gene sequences and the core-genome analysis revealed that strain J379(T) forms a separate phylogenetic lineage within the recently amended order Solirubrobacterales. A comparison of the 16S rRNA gene sequences between strain J379(T) and other members of the order Solirubrobacterales showed <96 % similarity. This analysis revealed that the closest type strains were Parviterribacter kavangonensis D16/0 /H6(T) (95.2 %), Capillimicrobium parvum 0166_1(T) (94.9 %) and Conexibacter arvalis KV-962(T) (94.5 %). Whole-genome analysis showed that the closest type strain was Baekduia soli BR7-21(T) with an average nucleotide identity of 78 %, average amino acid identity of 63.2 % and percentage of conserved proteins of 48.2 %. The G+C content of the J379T genomic DNA was 71.7 mol%. Based on the phylogenetic and phylogenomic data, as well as its physiological characteristics, strain J379(T) is proposed to represent a type strain (DSM 113746(T)=CCM 9300(T)) of Svornostia abyssi gen. nov. sp. nov. within the family Baekduiaceae.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10606 - Microbiology

Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2024

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

International Journal of Systematic and Evolutionary Microbiology

ISSN

1466-5026

e-ISSN

1466-5034

Svazek periodika

74

Číslo periodika v rámci svazku

6

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

10

Strana od-do

006432

Kód UT WoS článku

001267352900003

EID výsledku v databázi Scopus

2-s2.0-85197018796