The genome of the endosymbiont-harboring trypanosomatid Kentomonas sorsogonicus
Identifikátory výsledku
Kód výsledku v IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61988987%3A17310%2F24%3AA25039LD" target="_blank" >RIV/61988987:17310/24:A25039LD - isvavai.cz</a>
Výsledek na webu
<a href="https://www.zin.ru/journals/protistology/num18_1/Zavataro_protistology_18-1.pdf" target="_blank" >https://www.zin.ru/journals/protistology/num18_1/Zavataro_protistology_18-1.pdf</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.21685/1680-0826-2024-18-1-7" target="_blank" >10.21685/1680-0826-2024-18-1-7</a>
Alternativní jazyky
Jazyk výsledku
angličtina
Název v původním jazyce
The genome of the endosymbiont-harboring trypanosomatid Kentomonas sorsogonicus
Popis výsledku v původním jazyce
The trypanosomatid subfamily Strigomonadinae, composed of the genera Angomonas, Strigomonas, and Kentomonas, is distinguished by the obligatory presence of endosymbiotic betaproteobacteria Candidatus Kinetoplastibacterium spp. This ancient and well-established symbiotic relationship features an intensive metabolic exchange and coordination of the cell division of the participants. In contrast to the extensively studied genera Angomonas and Strigomonas, little is known about Kentomonas, which has been described in 2014. Only one genome sequence of the bacterial endosymbiont (Ca. Ki. sorsogonicusi) is available. In this work, we report the high-quality genome sequence for the trypanosomatid Kentomonas sorsogonicus, obtained by a hybrid assembly of short Illumina and long PacBio read data. The assembly has a total length of ~34.8 Mb, with many scaffolds being as long as complete chromosomes in other trypanosomatid species. Our preliminary analysis demonstrates that the genome of this trypanosomatid is quite divergent, which significantly hampers functional annotation of its genes.
Název v anglickém jazyce
The genome of the endosymbiont-harboring trypanosomatid Kentomonas sorsogonicus
Popis výsledku anglicky
The trypanosomatid subfamily Strigomonadinae, composed of the genera Angomonas, Strigomonas, and Kentomonas, is distinguished by the obligatory presence of endosymbiotic betaproteobacteria Candidatus Kinetoplastibacterium spp. This ancient and well-established symbiotic relationship features an intensive metabolic exchange and coordination of the cell division of the participants. In contrast to the extensively studied genera Angomonas and Strigomonas, little is known about Kentomonas, which has been described in 2014. Only one genome sequence of the bacterial endosymbiont (Ca. Ki. sorsogonicusi) is available. In this work, we report the high-quality genome sequence for the trypanosomatid Kentomonas sorsogonicus, obtained by a hybrid assembly of short Illumina and long PacBio read data. The assembly has a total length of ~34.8 Mb, with many scaffolds being as long as complete chromosomes in other trypanosomatid species. Our preliminary analysis demonstrates that the genome of this trypanosomatid is quite divergent, which significantly hampers functional annotation of its genes.
Klasifikace
Druh
J<sub>SC</sub> - Článek v periodiku v databázi SCOPUS
CEP obor
—
OECD FORD obor
10606 - Microbiology
Návaznosti výsledku
Projekt
<a href="/cs/project/GA23-07695S" target="_blank" >GA23-07695S: Zkoumání evoluce genomu u eukaryot: poučení z nemodelových euglenozoí</a><br>
Návaznosti
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Ostatní
Rok uplatnění
2024
Kód důvěrnosti údajů
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Údaje specifické pro druh výsledku
Název periodika
Protistology
ISSN
1680-0826
e-ISSN
—
Svazek periodika
—
Číslo periodika v rámci svazku
1
Stát vydavatele periodika
RU - Ruská federace
Počet stran výsledku
10
Strana od-do
72-81
Kód UT WoS článku
—
EID výsledku v databázi Scopus
2-s2.0-85192260641