Image Processing and Analysis of Light Sheet Microscopy Data

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61989100%3A27240%2F24%3A10255187" target="_blank" >RIV/61989100:27240/24:10255187 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/61989100:27740/24:10255187

Výsledek na webu

<a href="https://onlinelibrary.wiley.com/doi/abs/10.1002/9783527803910.ch7" target="_blank" >https://onlinelibrary.wiley.com/doi/abs/10.1002/9783527803910.ch7</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1002/9783527803910.ch7" target="_blank" >10.1002/9783527803910.ch7</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Image Processing and Analysis of Light Sheet Microscopy Data

Popis výsledku v původním jazyce

Image processing of light sheet data involves several specific challenges that are not encountered in other imaging modalities. The ability to image the same specimen from multiple angles necessitates image registration and fusion before the data can be used for subsequent analysis. The solution to this preprocessing task is complicated by the large volume of the image data acquired with any light sheet microscope. The scale of the data also affects the downstream analysis of objects of biological interest in the imagery. While the tasks are similar to other imaging modalities -segmentation, tracking, and atlas registration - the volume of the data requires the development of dedicated solutions on both the software and hardware sides. This chapter provides an overview of the available solutions to tackle the preprocessing and analysis of light sheet data at scale using primarily open-source image analysis platforms.

Název v anglickém jazyce

Image Processing and Analysis of Light Sheet Microscopy Data

Popis výsledku anglicky

Image processing of light sheet data involves several specific challenges that are not encountered in other imaging modalities. The ability to image the same specimen from multiple angles necessitates image registration and fusion before the data can be used for subsequent analysis. The solution to this preprocessing task is complicated by the large volume of the image data acquired with any light sheet microscope. The scale of the data also affects the downstream analysis of objects of biological interest in the imagery. While the tasks are similar to other imaging modalities -segmentation, tracking, and atlas registration - the volume of the data requires the development of dedicated solutions on both the software and hardware sides. This chapter provides an overview of the available solutions to tackle the preprocessing and analysis of light sheet data at scale using primarily open-source image analysis platforms.

Druh

C - Kapitola v odborné knize

CEP obor

—

OECD FORD obor

10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Projekt

<a href="/cs/project/EF16_013%2F0001791" target="_blank" >EF16_013/0001791: IT4Innovations národní superpočítačové centrum - cesta k exascale</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2024

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název knihy nebo sborníku

Light Sheet Fluorescence Microscopy

ISBN

978-3-527-34135-1

Počet stran výsledku

28

Strana od-do

203-230

Počet stran knihy

394

Název nakladatele

Wiley-VCH

Místo vydání

Weinheim

Kód UT WoS kapitoly

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