Phylogenomic and mitogenomic data can accelerate inventorying of tropical beetles during the current biodiversity crisis

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61989592%3A15310%2F21%3A73611914" target="_blank" >RIV/61989592:15310/21:73611914 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/61989592:15640/21:73611914

Výsledek na webu

<a href="https://elifesciences.org/articles/71895" target="_blank" >https://elifesciences.org/articles/71895</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.7554/eLife.71895" target="_blank" >10.7554/eLife.71895</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Phylogenomic and mitogenomic data can accelerate inventorying of tropical beetles during the current biodiversity crisis

Popis výsledku v původním jazyce

Conservation efforts must be evidence-based, so rapid and economically feasible methods should be used to quantify diversity and distribution patterns. We have attempted to overcome current impediments to the gathering of biodiversity data by using integrative phylogenomic and three mtDNA fragment analyses. As a model, we sequenced the Metriorrhynchini beetle fauna, sampled from similar to 700 localities in three continents. The species-rich dataset included similar to 6500 terminals, similar to 1850 putative species delimited at 5% uncorrected pairwise threshold, possibly similar to 1000 of them unknown to science. Neither type of data could alone answer our questions on biodiversity and phylogeny. The phylogenomic backbone enabled the integrative delimitation of robustly defined natural genus-group units that will inform future research. Using constrained mtDNA analysis, we identified the spatial structure of species diversity, very high species-level endemism, and a biodiversity hotspot in New Guinea. We suggest that focused field research and subsequent laboratory and bioinformatic workflow steps would substantially accelerate the inventorying of any hyperdiverse tropical group with several thousand species. The outcome would be a scaffold for the incorporation of further data from environmental sequencing and ecological studies. The database of sequences could set a benchmark for the spatiotemporal evaluation of biodiversity, would support evidence-based conservation planning, and would provide a rob ust framework for systematic, biogeographic, and evolutionary studies.

Název v anglickém jazyce

Phylogenomic and mitogenomic data can accelerate inventorying of tropical beetles during the current biodiversity crisis

Popis výsledku anglicky

Conservation efforts must be evidence-based, so rapid and economically feasible methods should be used to quantify diversity and distribution patterns. We have attempted to overcome current impediments to the gathering of biodiversity data by using integrative phylogenomic and three mtDNA fragment analyses. As a model, we sequenced the Metriorrhynchini beetle fauna, sampled from similar to 700 localities in three continents. The species-rich dataset included similar to 6500 terminals, similar to 1850 putative species delimited at 5% uncorrected pairwise threshold, possibly similar to 1000 of them unknown to science. Neither type of data could alone answer our questions on biodiversity and phylogeny. The phylogenomic backbone enabled the integrative delimitation of robustly defined natural genus-group units that will inform future research. Using constrained mtDNA analysis, we identified the spatial structure of species diversity, very high species-level endemism, and a biodiversity hotspot in New Guinea. We suggest that focused field research and subsequent laboratory and bioinformatic workflow steps would substantially accelerate the inventorying of any hyperdiverse tropical group with several thousand species. The outcome would be a scaffold for the incorporation of further data from environmental sequencing and ecological studies. The database of sequences could set a benchmark for the spatiotemporal evaluation of biodiversity, would support evidence-based conservation planning, and would provide a rob ust framework for systematic, biogeographic, and evolutionary studies.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10620 - Other biological topics

Projekt

<a href="/cs/project/GA18-14942S" target="_blank" >GA18-14942S: Evoluce aposematických vzorů v rozsáhlých Mülleriánských mimetických systémech</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2021

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

eLife

ISSN

2050-084X

e-ISSN

—

Svazek periodika

10

Číslo periodika v rámci svazku

DEC

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

47

Strana od-do

"nečíslováno"

Kód UT WoS článku

000750005800001

EID výsledku v databázi Scopus

2-s2.0-85122034097