Využití konformačních rodin tripeptidů pro tvorbu modelů peptidů

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F62157124%3A16370%2F06%3A00000737" target="_blank" >RIV/62157124:16370/06:00000737 - isvavai.cz</a>

Výsledek na webu

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DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

The use of tripeptide conformation families in protein model building

Popis výsledku v původním jazyce

Conformation family is a useful concept for classification of proteins and nucleic acid structures. This classification is used in methods for prediction of protein structures, various model building programs, and as a tool for protein structure verification. There is no clear definition of conformation family in the literature. Clusters of similar structures usually represent conformation family. Conformation families for tripeptides were determined by a method of conformation-family search in multidimensional torsion-angle space [1]. The families were classified according to positions in the Ramachandran map and studied for the purpose of automatic protein model building. The model building method was tested on a green fluorescent protein which is frequently used as a reporter protein [2]. The crystal structure with PDB code 1EMB was selected for the testing. The structure of the protein was build up automatically with a program NUT [3] and the structure building was analyzed in deta

Název v anglickém jazyce

The use of tripeptide conformation families in protein model building

Popis výsledku anglicky

Conformation family is a useful concept for classification of proteins and nucleic acid structures. This classification is used in methods for prediction of protein structures, various model building programs, and as a tool for protein structure verification. There is no clear definition of conformation family in the literature. Clusters of similar structures usually represent conformation family. Conformation families for tripeptides were determined by a method of conformation-family search in multidimensional torsion-angle space [1]. The families were classified according to positions in the Ramachandran map and studied for the purpose of automatic protein model building. The model building method was tested on a green fluorescent protein which is frequently used as a reporter protein [2]. The crystal structure with PDB code 1EMB was selected for the testing. The structure of the protein was build up automatically with a program NUT [3] and the structure building was analyzed in deta

Druh

M - Uspořádání konference

CEP obor

CE - Biochemie

OECD FORD obor

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Projekt

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Návaznosti

S - Specificky vyzkum na vysokych skolach

Rok uplatnění

2006

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Místo konání akce

Piešťany

Stát konání akce

SK - Slovenská republika

Datum zahájení akce

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Datum ukončení akce

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Celkový počet účastníků

200

Počet zahraničních účastníků

180

Typ akce podle státní přísl. účastníků

EUR - Evropská akce