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Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F12%3A00057285" target="_blank" >RIV/00216224:14330/12:00057285 - isvavai.cz</a>

  • Result on the web

    <a href="http://dx.doi.org/10.1007/978-3-642-31298-4_56" target="_blank" >http://dx.doi.org/10.1007/978-3-642-31298-4_56</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/978-3-642-31298-4_56" target="_blank" >10.1007/978-3-642-31298-4_56</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy

  • Original language description

    In the field of biomedical image analysis, motion tracking and segmentation algorithms are important tools for time-resolved analysis of cell characteristics, events, and tracking. There are many algorithms in everyday use. Nevertheless, most of them isnot properly validated as the ground truth (GT), which is a very important tool for the verification of image processing algorithms, is not naturally available. Many algorithms in this field of study are, therefore, validated only manually by an human expert. This is usually difficult, cumbersome and time consuming task, especially when single 3D image or even 3D image sequence is considered. In this paper, we have proposed a technique that generates time-lapse sequences of fully 3D synthetic image datasets. It includes generating shape, structure, and also motion of selected biological objects. The corresponding GT data is generated as well. The technique is focused on the generation of synthetic objects at various scales.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    JD - Use of computers, robotics and its application

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/GBP302%2F12%2FG157" target="_blank" >GBP302/12/G157: Dynamics and Organization of Chromosomes in the Cell Cycle and during Differentiation under Normal and Pathological Conditions</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2012

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Proceedings of 9th International Conference on Image Analysis and Recognition

  • ISBN

    9783642312977

  • ISSN

    0302-9743

  • e-ISSN

  • Number of pages

    10

  • Pages from-to

    473-482

  • Publisher name

    Springer-Verlag

  • Place of publication

    Heidelberg

  • Event location

    Aveiro, Portugal

  • Event date

    Jun 25, 2012

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article