DNA reads feature extraction analysis

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216305%3A26220%2F17%3APU124431" target="_blank" >RIV/00216305:26220/17:PU124431 - isvavai.cz</a>
Result on the web
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DOI - Digital Object Identifier
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Result language
angličtina
Original language name
DNA reads feature extraction analysis
Original language description
As the price of genome sequencing decreased, the complete genome sequencing is the new standard for exploring biological abilities of organisms. The commonly known contaminants like proteins and RNA are efficiently ousted but there is another contaminant which is diverse DNA. DNA contaminants are common in sequencing output and until recently nobody reckons with it, they are also part of already published genomes. The paper deals with issues by using alternative approach of genomic signal processing and other computational methods. The main objective is to detect contaminants in sequencing output and evaluate the analyses of usable features.
Czech name
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Czech description
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Project
<a href="/en/project/GA17-01821S" target="_blank" >GA17-01821S: High throughput bacterial genome assembly and annotation techniques using genomic signal processing</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2017
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Article name in the collection
Proceedings of IEEE Student Branch Conference Mikulov 2017
ISBN
978-80-214-5526-9
ISSN
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e-ISSN
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Number of pages
4
Pages from-to
33-36
Publisher name
Neuveden
Place of publication
Neuveden
Event location
Mikulov, Czech republic
Event date
Aug 28, 2017
Type of event by nationality
EUR - Evropská akce
UT code for WoS article
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