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A semi-automatic software tool for batch processing of yeast colony images

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985556%3A_____%2F11%3A00356817" target="_blank" >RIV/67985556:_____/11:00356817 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    A semi-automatic software tool for batch processing of yeast colony images

  • Original language description

    A software application for batch counting of yeast colonies in images of Petri dishes, based on the fast radial transform by Loy and Zelinsky, is introduced in the paper. The motivation to develop our own tool, was based on the requirement to reuse the imaging equipment already existing in the laboratory, as well as the possibility to adapt the ap- plication to the needs of the laboratory. The tool is designed to process image sets prepared beforehand in the darkroom and to automate the process of counting as much as possible. The tool operates either in a fully automatic mode, or provides an interactive editor for correction of the machine processing result. The performance of the tool has been evaluated using a test set of 245 images. The applicationis available for download or can be requested from the authors of the paper, in both cases free of charge.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    JC - Computer hardware and software

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/1M0567" target="_blank" >1M0567: Centre for Applied Cybernetics</a><br>

  • Continuities

    Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2011

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Proceedings of the Eighth IASTED International Conference on Signal Processing, Pattern Recognition, and Applications

  • ISBN

    978-0-88986-865-6

  • ISSN

  • e-ISSN

  • Number of pages

    7

  • Pages from-to

  • Publisher name

    The International Association of Science and Technology for Development (IASTED)

  • Place of publication

    Innsbruck

  • Event location

    Innsbruck

  • Event date

    Feb 16, 2011

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article