Volume visualization of biological tissue specimens using confocal microscopy
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985823%3A_____%2F06%3A00080615" target="_blank" >RIV/67985823:_____/06:00080615 - isvavai.cz</a>
Alternative codes found
RIV/68407700:21460/06:12119994
Result on the web
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DOI - Digital Object Identifier
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Alternative languages
Result language
angličtina
Original language name
Volume visualization of biological tissue specimens using confocal microscopy
Original language description
We use volume reconstruction as a technique for visualization of biological tissue specimens which are greater than the field of view of a confocal laser scanning microscope. Prior to the volume reconstruction, large specimens are cut into thin physicalslices. The first step of volume reconstruction is acquisition of sets of digital volume images (spatial tiles which overlap) from all studied physical slices. The second step is horizontal merging of overlapping spatial tiles of the same physical slice(stitching). The third reconstruction step represents vertical merging of digital volumes of successive physical slices of the specimen. We applied a curve-driven elastic registration algorithm which models deformations by using B-splines. The resultinglarge digital volumes are visualized using a VolumePro hardware board that offers real-time 3D volume rendering. In this paper we show reconstruction of a laboratory rat oesophagus
Czech name
Objemová vizualizace biologických tkáňových vzorků s použitím konfokální mikroskopie
Czech description
Článek popisuje objemovou rekonstrukci a vizualizaci biologických tkáňových vzorku s použitím konfokální mikroskopie, jejichž velikost je větší než zorné pole a hloubka proniku konfokálního mikroskopu. Je využívána registrace obrazů s použitím Euklidovských transformací a elastických deformací modelovaných pomocí B-splinů
Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
JC - Computer hardware and software
OECD FORD branch
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Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2006
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Lékař a technika. Biomedicinské inženýrství a informatika
ISSN
0301-5491
e-ISSN
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Volume of the periodical
36
Issue of the periodical within the volume
2
Country of publishing house
CZ - CZECH REPUBLIC
Number of pages
5
Pages from-to
240-244
UT code for WoS article
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EID of the result in the Scopus database
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