Classification of Aeromonas spp. isolated from water and clinical sources and distribution of virulence genes

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F16%3A00091233" target="_blank" >RIV/00216224:14310/16:00091233 - isvavai.cz</a>

Výsledek na webu

<a href="http://dx.doi.org/10.1007/s12223-016-0464-9" target="_blank" >http://dx.doi.org/10.1007/s12223-016-0464-9</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s12223-016-0464-9" target="_blank" >10.1007/s12223-016-0464-9</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Classification of Aeromonas spp. isolated from water and clinical sources and distribution of virulence genes

Popis výsledku v původním jazyce

In this work, 84 isolates of aeromonads were isolated from water and clinical samples, identified, and characterized. Identification was based on routine phenotyping combined with multiplex PCR. In this study, multiplex PCR was retested and reevaluated and its identification key was enhanced by 17 newly described species and five subspecies. Identification score increased from 36 % (only phenotyping) to 90% when supported with multiplex PCR. Further description of isolates included detection of eight virulence genes. These genes were overall present in 46 % (act), 2.4 % (ast), 80%(alt), 40%(ahh1), 20%(asa1), 69%(pla/lip/lipH3/alp- 1), 69 % (ser), and 81 % (fla), and no significant differences between water and clinical isolates were found. Results of this work show that the proper combination of different approaches is necessary for final identification of Aeromonas spp. at the species level.

Název v anglickém jazyce

Classification of Aeromonas spp. isolated from water and clinical sources and distribution of virulence genes

Popis výsledku anglicky

In this work, 84 isolates of aeromonads were isolated from water and clinical samples, identified, and characterized. Identification was based on routine phenotyping combined with multiplex PCR. In this study, multiplex PCR was retested and reevaluated and its identification key was enhanced by 17 newly described species and five subspecies. Identification score increased from 36 % (only phenotyping) to 90% when supported with multiplex PCR. Further description of isolates included detection of eight virulence genes. These genes were overall present in 46 % (act), 2.4 % (ast), 80%(alt), 40%(ahh1), 20%(asa1), 69%(pla/lip/lipH3/alp- 1), 69 % (ser), and 81 % (fla), and no significant differences between water and clinical isolates were found. Results of this work show that the proper combination of different approaches is necessary for final identification of Aeromonas spp. at the species level.

Druh

J_x - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)

CEP obor

EE - Mikrobiologie, virologie

OECD FORD obor

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Projekt

<a href="/cs/project/EE2.3.20.0183" target="_blank" >EE2.3.20.0183: Centrum experimentální biomedicíny</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2016

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Folia Microbiologica

ISSN

0015-5632

e-ISSN

—

Svazek periodika

61

Číslo periodika v rámci svazku

6

Stát vydavatele periodika

NL - Nizozemsko

Počet stran výsledku

9

Strana od-do

513-521

Kód UT WoS článku

000386351700009

EID výsledku v databázi Scopus

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