Five novel bifidobacterial species isolated from faeces of primates in two Czech zoos: Bifidobacterium erythrocebi sp. nov., Bifidobacterium moraviense sp. nov., Bifidobacterium oedipodis sp. nov., Bifidobacterium olomucense sp. nov. and Bifidobacterium panos sp. nov

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41210%2F20%3AN0000108" target="_blank" >RIV/60460709:41210/20:N0000108 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/60460709:41210/21:83505

Výsledek na webu

<a href="https://doi.org/10.1099/ijsem.0.004573" target="_blank" >https://doi.org/10.1099/ijsem.0.004573</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1099/ijsem.0.004573" target="_blank" >10.1099/ijsem.0.004573</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Five novel bifidobacterial species isolated from faeces of primates in two Czech zoos: Bifidobacterium erythrocebi sp. nov., Bifidobacterium moraviense sp. nov., Bifidobacterium oedipodis sp. nov., Bifidobacterium olomucense sp. nov. and Bifidobacterium panos sp. nov

Popis výsledku v původním jazyce

Five Bifidobacterium strains, VB23T, VB24T, VB25T, VB26T and VB31T, were isolated from chimpanzee (Pan troglodytes), cotton-top tamarin (Saguinus oedipus), Goeldis marmoset (Callimico goeldii), moustached tamarin (Saguinus mystax) and patas monkey (Erythrocebus patas), respectively, which were kept in two Czech zoos. These strains were isolated from faecal samples and were Gram-positive, non-motile, non-sporulating, anaerobic and fructose-6-phosphate phosphoketolase-positive. Phylogenetic analyses based on 16S rRNA revealed close relatedness between VB23T and Bifidobacterium angulatum LMG 11039T, VB24T and Bifidobacterium pullorum subsp. pullorum DSM 20433T, VB25T and Bifidobacterium goeldii LMG 30939T, VB26T and Bifidobacterium imperatoris LMG 30297T, and VB31T and B . angulatum LMG 11039T. Internal transcribed spacer profiling revealed that VB23T, VB24T, VB25T, VB26T and VB31T had highest similarity to Bifidobacterium breve LMG 13208T, Bifidobacterium longum subsp. infantis ATCC 15697T, Bifidobacterium biavatii DSM 23969T, B. breve LMG 13208T and B. angulatum LMG 11039T, respectively. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) analyses with their closest neighbours supported the independent phylogenetic positions of the strains with values. These genomic and phylogenetic analyses suggested that the evaluated strains were novel Bifidobacterium species named Bifidobacterium erythrocebi sp. nov. VB31T=DSM 109960T=CCUG 73843T, Bifidobacterium moraviense sp. nov. VB25T=DSM 109958T=CCUG 73842T, Bifidobacterium oedipodis sp. nov. VB24T=DSM 109957T=CCUG 73932T, Bifidobacterium olomucense sp. nov. VB26T=DSM 109959T=CCUG 73845T and Bifidobacterium panos sp. nov. VB23T=DSM 109963T=CCUG 73840T.

Název v anglickém jazyce

Five novel bifidobacterial species isolated from faeces of primates in two Czech zoos: Bifidobacterium erythrocebi sp. nov., Bifidobacterium moraviense sp. nov., Bifidobacterium oedipodis sp. nov., Bifidobacterium olomucense sp. nov. and Bifidobacterium panos sp. nov

Popis výsledku anglicky

Five Bifidobacterium strains, VB23T, VB24T, VB25T, VB26T and VB31T, were isolated from chimpanzee (Pan troglodytes), cotton-top tamarin (Saguinus oedipus), Goeldis marmoset (Callimico goeldii), moustached tamarin (Saguinus mystax) and patas monkey (Erythrocebus patas), respectively, which were kept in two Czech zoos. These strains were isolated from faecal samples and were Gram-positive, non-motile, non-sporulating, anaerobic and fructose-6-phosphate phosphoketolase-positive. Phylogenetic analyses based on 16S rRNA revealed close relatedness between VB23T and Bifidobacterium angulatum LMG 11039T, VB24T and Bifidobacterium pullorum subsp. pullorum DSM 20433T, VB25T and Bifidobacterium goeldii LMG 30939T, VB26T and Bifidobacterium imperatoris LMG 30297T, and VB31T and B . angulatum LMG 11039T. Internal transcribed spacer profiling revealed that VB23T, VB24T, VB25T, VB26T and VB31T had highest similarity to Bifidobacterium breve LMG 13208T, Bifidobacterium longum subsp. infantis ATCC 15697T, Bifidobacterium biavatii DSM 23969T, B. breve LMG 13208T and B. angulatum LMG 11039T, respectively. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) analyses with their closest neighbours supported the independent phylogenetic positions of the strains with values. These genomic and phylogenetic analyses suggested that the evaluated strains were novel Bifidobacterium species named Bifidobacterium erythrocebi sp. nov. VB31T=DSM 109960T=CCUG 73843T, Bifidobacterium moraviense sp. nov. VB25T=DSM 109958T=CCUG 73842T, Bifidobacterium oedipodis sp. nov. VB24T=DSM 109957T=CCUG 73932T, Bifidobacterium olomucense sp. nov. VB26T=DSM 109959T=CCUG 73845T and Bifidobacterium panos sp. nov. VB23T=DSM 109963T=CCUG 73840T.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10606 - Microbiology

Projekt

<a href="/cs/project/EF16_019%2F0000845" target="_blank" >EF16_019/0000845: Centrum pro studium vzniku a transformací nutričně významných látek v potravním řetězci v interakci s potenciálně rizikovými látkami antropogenního původu: komplexní posouzení rizika kontaminace půdy pro kvalitu zemědělské produkce</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2020

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

International Journal of Systematic and Evolutionary Microbiology

ISSN

1466-5026

e-ISSN

—

Svazek periodika

71

Číslo periodika v rámci svazku

1

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

12

Strana od-do

1-12

Kód UT WoS článku

000636433500012

EID výsledku v databázi Scopus

2-s2.0-85099963601