Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985904%3A_____%2F20%3A00537813" target="_blank" >RIV/67985904:_____/20:00537813 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/60460709:41210/20:82216 RIV/46747885:24220/20:00007773

Výsledek na webu

<a href="https://asep.lib.cas.cz/arl-cav/cs/csg/?repo=crepo1&key=69381729753" target="_blank" >https://asep.lib.cas.cz/arl-cav/cs/csg/?repo=crepo1&key=69381729753</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1099/ijsem.0.004378" target="_blank" >10.1099/ijsem.0.004378</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)

Popis výsledku v původním jazyce

A fructose-6-phosphate phosphoketolase-positive strain (GSD1FS(T)) was isolated from a faecal sample of a 3 weeks old German Shepherd dog. The closest related taxa to isolate GSD1FS(T) based on results from the EZBioCloud database were Bifidobacterium animalis subsp. animalis ATCC 25527(T), Bifidobacterium animalis subsp. lactis DSM 10140(T) and Bifidobacterium anseris LMG 30189(T), belonging to the Bifidobacterium pseudolongum phylogenetic group. The resulting 16S rRNA gene identities (compared length of 1454 nucleotides) towards these taxa were 97.30, 97.23 and 97.09%, respectively. The pairwise similarities of strain GSD1FS(T) using argS, atpA, fusA, hsp60, pyrG, rpsC, thrS and xfp gene fragments to all valid representatives of the B. pseudolongum phylogenetic group were in the concatenated range of 83.08-88.34%. Phylogenomic analysis based on whole-genome methods such as average nucleotide identity revealed that bifidobacterial strain GSD1FS(T) exhibits close phylogenetic relatedness (88.17%) to Bifidobacetrium cuniculi LMG 10738(T). Genotypic characteristics and phylogenetic analyses based on nine molecular markers, as well as genomic and comparative phenotypic analyses, clearly proved that the evaluated strain should be considered as representing a novel species within the B. pseudolongum phylogenetic group named as Bifidobacterium canis sp. nov. (GSD1FS(T)=DSM 105923(T)=LMG 30345(T)=CCM 8806(T)).

Název v anglickém jazyce

Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)

Popis výsledku anglicky

A fructose-6-phosphate phosphoketolase-positive strain (GSD1FS(T)) was isolated from a faecal sample of a 3 weeks old German Shepherd dog. The closest related taxa to isolate GSD1FS(T) based on results from the EZBioCloud database were Bifidobacterium animalis subsp. animalis ATCC 25527(T), Bifidobacterium animalis subsp. lactis DSM 10140(T) and Bifidobacterium anseris LMG 30189(T), belonging to the Bifidobacterium pseudolongum phylogenetic group. The resulting 16S rRNA gene identities (compared length of 1454 nucleotides) towards these taxa were 97.30, 97.23 and 97.09%, respectively. The pairwise similarities of strain GSD1FS(T) using argS, atpA, fusA, hsp60, pyrG, rpsC, thrS and xfp gene fragments to all valid representatives of the B. pseudolongum phylogenetic group were in the concatenated range of 83.08-88.34%. Phylogenomic analysis based on whole-genome methods such as average nucleotide identity revealed that bifidobacterial strain GSD1FS(T) exhibits close phylogenetic relatedness (88.17%) to Bifidobacetrium cuniculi LMG 10738(T). Genotypic characteristics and phylogenetic analyses based on nine molecular markers, as well as genomic and comparative phenotypic analyses, clearly proved that the evaluated strain should be considered as representing a novel species within the B. pseudolongum phylogenetic group named as Bifidobacterium canis sp. nov. (GSD1FS(T)=DSM 105923(T)=LMG 30345(T)=CCM 8806(T)).

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10606 - Microbiology

Projekt

—

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2020

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

International Journal of Systematic and Evolutionary Microbiology

ISSN

1466-5026

e-ISSN

—

Svazek periodika

70

Číslo periodika v rámci svazku

9

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

8

Strana od-do

5040-5047

Kód UT WoS článku

000577279800027

EID výsledku v databázi Scopus

2-s2.0-85091717602