Development, characterization and cross-amplification of 16 microsatellite primers for Atriplex tatarica (Amaranthaceae)

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41330%2F17%3A75191" target="_blank" >RIV/60460709:41330/17:75191 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/67985939:_____/17:00487739

Výsledek na webu

<a href="http://dx.doi.org/10.3732/apps.1700094" target="_blank" >http://dx.doi.org/10.3732/apps.1700094</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.3732/apps.1700094" target="_blank" >10.3732/apps.1700094</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Development, characterization and cross-amplification of 16 microsatellite primers for Atriplex tatarica (Amaranthaceae)

Popis výsledku v původním jazyce

Microsatellite primers were developed to characterize the genetic diversity and structuring of the annual herb Atriplex tatarica (Amaranthaceae) and to facilitate ecological and evolutionary studies of A. tatarica and its relatives. Sixteen novel microsatellite primers were developed for A. tatarica based on high-throughput sequencing of enriched libraries. All markers were polymorphic, with the number of alleles per locus ranging from 3 to 25 and observed and expected heterozygosity ranging from 0,10 to 0,90 and 0,10 to 0,76, respectively. Additionally, some of these loci were successfully amplified and showed polymorphisms in four Atriplex and seven Chenopodium species. The microsatellite markers published here will be useful in assessing genetic diversity, structuring and gene flow within and across populations of A. tatarica as well as other species of Atriplex and of the related genus Chenopodium.

Název v anglickém jazyce

Development, characterization and cross-amplification of 16 microsatellite primers for Atriplex tatarica (Amaranthaceae)

Popis výsledku anglicky

Microsatellite primers were developed to characterize the genetic diversity and structuring of the annual herb Atriplex tatarica (Amaranthaceae) and to facilitate ecological and evolutionary studies of A. tatarica and its relatives. Sixteen novel microsatellite primers were developed for A. tatarica based on high-throughput sequencing of enriched libraries. All markers were polymorphic, with the number of alleles per locus ranging from 3 to 25 and observed and expected heterozygosity ranging from 0,10 to 0,90 and 0,10 to 0,76, respectively. Additionally, some of these loci were successfully amplified and showed polymorphisms in four Atriplex and seven Chenopodium species. The microsatellite markers published here will be useful in assessing genetic diversity, structuring and gene flow within and across populations of A. tatarica as well as other species of Atriplex and of the related genus Chenopodium.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10611 - Plant sciences, botany

Projekt

<a href="/cs/project/GA15-06632S" target="_blank" >GA15-06632S: Význam klimatu a historie populací pro expanzi druhu na okrajích areálu</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2017

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Applications in Plant Sciences 

ISSN

2168-0450

e-ISSN

—

Svazek periodika

5

Číslo periodika v rámci svazku

11

Stát vydavatele periodika

US - Spojené státy americké

Počet stran výsledku

5

Strana od-do

1-5

Kód UT WoS článku

000416284400005

EID výsledku v databázi Scopus

2-s2.0-85034591289