PhAL (Phage Display Alignment software)

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00209805%3A_____%2F24%3A00080065" target="_blank" >RIV/00209805:_____/24:00080065 - isvavai.cz</a>

Výsledek na webu

<a href="https://www.mou.cz/vyzkumne-centrum-aplikovane-molekularni-onkologie-recamo/t1478" target="_blank" >https://www.mou.cz/vyzkumne-centrum-aplikovane-molekularni-onkologie-recamo/t1478</a>

DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

PhAL (Phage Display Alignment software)

Popis výsledku v původním jazyce

PhAL (Phage Display Alignment software) is a novel bioinformatics tool which was developed for alignment of short sequences from phage display on the reference sequence of the protein which is intended as an target for antibody which is being investigated. Software uses algorithm of local alignment and provides template-based analysis of the phage display for antibodies. A text file containing short nucleotide sequences serves as input for the software.The nucleotide sequences are subsequently converted to peptide sequences and subsequently analyzed using local alignment to a reference protein sequence. The output is a text file with the protein sequence and the number of reads aligned for each amino acid. The maximum values determine the antibody binding site.

Název v anglickém jazyce

PhAL (Phage Display Alignment software)

Popis výsledku anglicky

PhAL (Phage Display Alignment software) is a novel bioinformatics tool which was developed for alignment of short sequences from phage display on the reference sequence of the protein which is intended as an target for antibody which is being investigated. Software uses algorithm of local alignment and provides template-based analysis of the phage display for antibodies. A text file containing short nucleotide sequences serves as input for the software.The nucleotide sequences are subsequently converted to peptide sequences and subsequently analyzed using local alignment to a reference protein sequence. The output is a text file with the protein sequence and the number of reads aligned for each amino acid. The maximum values determine the antibody binding site.

Druh

R - Software

CEP obor

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OECD FORD obor

10608 - Biochemistry and molecular biology

Projekt

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Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2024

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Interní identifikační kód produktu

2024-1

Technické parametry

https://www.mou.cz/vyzkumne-centrum-aplikovane-molekularni-onkologie-recamo/t1478

Ekonomické parametry

nerelevantní

IČO vlastníka výsledku

00209805

Název vlastníka

Masarykův onkologický ústav