Molecular Phylogenetic Assessment of Fungal Biodiversity in Olomouc Region Soil: An ITS-Based Approach

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F26784246%3A_____%2F24%3AN0000007" target="_blank" >RIV/26784246:_____/24:N0000007 - isvavai.cz</a>

Výsledek na webu

<a href="https://www.vupt.cz/cz/casopis-uroda" target="_blank" >https://www.vupt.cz/cz/casopis-uroda</a>

DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

Molecular Phylogenetic Assessment of Fungal Biodiversity in Olomouc Region Soil: An ITS-Based Approach

Popis výsledku v původním jazyce

The advent of modern molecular marker technologies has greatly facilitated the rapid identification, characterization, and detection of important soil fungi, such as species of Fusarium, which were previously difficult to detect using traditional microbiological methods. Molecular tools can now rapidly characterize fungal biodiversity using small quantities of DNA or direct fungal mycelium samples. Various molecular markers, including RFLP, RAPD, SSR, AFLP, ITS, and IGS, have accelerated the identification and characterization of soil fungi over recent decades. Among these, the internal transcribed spacer (ITS) region of ribosomal RNA genes is widely used due to its ability to identify fungi at the genus and species levels, supported by its extensive representation in sequence databases such as NCBI. This study, ITS sequencing of fungal species has expanded the understanding of soil fungal populations in the Olomouc region, paving the way for broader fungal diversity assessments using samples from different ecosystems in future studies.

Název v anglickém jazyce

Molecular Phylogenetic Assessment of Fungal Biodiversity in Olomouc Region Soil: An ITS-Based Approach

Popis výsledku anglicky

The advent of modern molecular marker technologies has greatly facilitated the rapid identification, characterization, and detection of important soil fungi, such as species of Fusarium, which were previously difficult to detect using traditional microbiological methods. Molecular tools can now rapidly characterize fungal biodiversity using small quantities of DNA or direct fungal mycelium samples. Various molecular markers, including RFLP, RAPD, SSR, AFLP, ITS, and IGS, have accelerated the identification and characterization of soil fungi over recent decades. Among these, the internal transcribed spacer (ITS) region of ribosomal RNA genes is widely used due to its ability to identify fungi at the genus and species levels, supported by its extensive representation in sequence databases such as NCBI. This study, ITS sequencing of fungal species has expanded the understanding of soil fungal populations in the Olomouc region, paving the way for broader fungal diversity assessments using samples from different ecosystems in future studies.

Druh

J_ost - Ostatní články v recenzovaných periodicích

CEP obor

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OECD FORD obor

40106 - Agronomy, plant breeding and plant protection; (Agricultural biotechnology to be 4.4)

Projekt

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Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2024

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Úroda – vědecká příloha časopisu

ISSN

0139-6013

e-ISSN

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Svazek periodika

72

Číslo periodika v rámci svazku

12

Stát vydavatele periodika

CZ - Česká republika

Počet stran výsledku

7

Strana od-do

149–155

Kód UT WoS článku

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EID výsledku v databázi Scopus

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