Whole-genome sequence of a reassortant G9P[4] rotavirus A strain from two children in the Czech Republic

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61989592%3A15110%2F20%3A73605717" target="_blank" >RIV/61989592:15110/20:73605717 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/00027162:_____/20:N0000010

Výsledek na webu

<a href="https://link.springer.com/article/10.1007/s00705-020-04648-w" target="_blank" >https://link.springer.com/article/10.1007/s00705-020-04648-w</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s00705-020-04648-w" target="_blank" >10.1007/s00705-020-04648-w</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Whole-genome sequence of a reassortant G9P[4] rotavirus A strain from two children in the Czech Republic

Popis výsledku v původním jazyce

Rotavirus A (RVA) belongs to the family Reoviridae and possesses a trilaminar capsid enclosing 11 segments of double-stranded RNA. RVAs are classified into G and P types based on the nucleotide sequences of the genes coding the capsid proteins VP7 (G-types) and VP4 (P-types) [1]. The whole-genome classification of all 11 genes uses the abbreviations Gx-P[x]-Ix-Rx-Cx-Mx-Ax-Nx-Tx-Ex-Hx, where x indicates the genotype number [2]. Most human RVA strains possess either the Wa-like constellation (I1-R1-C1-M1-A1-N1-T1-E1-H1) or the DS-1-like constellation (I2-R2-C2-M2-A2-N2-T2-E2-H2), which are believed to have evolved from pig and cow RVAs, respectively [3]. G9P[4] RVA strains were first described in Brazil in the 1990s [4], and this genotype later spread to Latin America and the USA [5, 6]. Other strains that were genetically distinct from American G9P[4] RVAs were detected in Japan [7]. G9P[4] strains have become highly prevalent on the Indian subcontinent [8], but they are not very common in Europe. G9P[4] strains have been described in Italy in young patients 0–5 years old and shown to have a complete DS-1-like genome segment constellation [9]. In Finland, G9P[4] strains emerged in the 2015-16 season and have been regularly detected since then [10].

Název v anglickém jazyce

Whole-genome sequence of a reassortant G9P[4] rotavirus A strain from two children in the Czech Republic

Popis výsledku anglicky

Rotavirus A (RVA) belongs to the family Reoviridae and possesses a trilaminar capsid enclosing 11 segments of double-stranded RNA. RVAs are classified into G and P types based on the nucleotide sequences of the genes coding the capsid proteins VP7 (G-types) and VP4 (P-types) [1]. The whole-genome classification of all 11 genes uses the abbreviations Gx-P[x]-Ix-Rx-Cx-Mx-Ax-Nx-Tx-Ex-Hx, where x indicates the genotype number [2]. Most human RVA strains possess either the Wa-like constellation (I1-R1-C1-M1-A1-N1-T1-E1-H1) or the DS-1-like constellation (I2-R2-C2-M2-A2-N2-T2-E2-H2), which are believed to have evolved from pig and cow RVAs, respectively [3]. G9P[4] RVA strains were first described in Brazil in the 1990s [4], and this genotype later spread to Latin America and the USA [5, 6]. Other strains that were genetically distinct from American G9P[4] RVAs were detected in Japan [7]. G9P[4] strains have become highly prevalent on the Indian subcontinent [8], but they are not very common in Europe. G9P[4] strains have been described in Italy in young patients 0–5 years old and shown to have a complete DS-1-like genome segment constellation [9]. In Finland, G9P[4] strains emerged in the 2015-16 season and have been regularly detected since then [10].

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10606 - Microbiology

Projekt

—

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2020

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

ARCHIVES OF VIROLOGY

ISSN

0304-8608

e-ISSN

—

Svazek periodika

165

Číslo periodika v rámci svazku

7

Stát vydavatele periodika

AT - Rakouská republika

Počet stran výsledku

4

Strana od-do

1703-1706

Kód UT WoS článku

000532654500003

EID výsledku v databázi Scopus

2-s2.0-85084564697